Microbial Omics

GToTree generates phylogenomic trees using genomic data by automating steps like gene selection, alignment, and tree inference. It is used in evolutionary biology research for genome-level evolutionary studies and comparative genomics.

Name: Email: Select a single-copy gene set: Genus: Species: Strain: Single-column file of NCBI assembly accessions:

Upload Protein Files (amino acid FASTA):

Drag and drop files here or click to select files.

Upload GenBank Files (.gbk, .gbff, .gb, or .gbf files):

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Upload Genome Files (nucleotide FASTA):

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Override Key (optional, for analysis of > 1000 genomes):

Please be sure to cite GToTree if you use it for your publication:
Lee, M. D. (2019). GToTree: a user-friendly workflow for phylogenomics. Bioinformatics , 35(20), 4162–4164.
https://doi.org/10.1093/bioinformatics/btz188